Building a phylogenetic tree 134567
نویسنده
چکیده
Several artificial organisms are shown on the cards. These drawings have been prepared so that it is easy to find differences and to distinguish between the characteristics of each organism. No numerical data are needed to distinguish between characteristics such as long and short birds’ tails. In contrast, with real organisms a researcher must usually collect numerical data and subjectively decide how to group characteristics or, alternatively, use advanced mathematical tools. Such problems do not exist when analysing molecular data. Phylogenetic trees for even distantly-related organisms may be prepared using amino acid or nucleotide sequence data. The differences between the sequences in different organisms indicate evolutionary distances. Wojciech Grajkowski
منابع مشابه
Quantitative Comparison of Tree Pairs Resulted from Gene and Protein Phylogenetic Trees for Sulfite Reductase Flavoprotein Alpha-Component and 5S rRNA and Taxonomic Trees in Selected Bacterial Species
Introduction: FAD is the cofactor of FAD-FR protein family. Sulfite reductase flavoprotein alpha-component is one of the main enzymes of this family. Based on applications of this enzyme in biotechnology and industry, it was chosen as the subject of evolutionary studies in 19 specific species. Method: Gene and protein sequences of sulfite reductase flavoprotein alpha-component, 5S rRNA sequence...
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Background: The intestinal tract of human can be infected by protozoan parasites. In this short communication, the stool samples were collected from patients with diarrhea referred to Kut hospital, Iraq, and then the parasites (Giardia lamblia, Entamoeba histolytica, Cryptosporidium parvum) were considered for molecular identification. Methods: Stool samples were collected from 69 patients wit...
متن کاملQuantitative Comparison of Tree Pairs Resulted from Gene and Protein Phylogenetic Trees for Sulfite Reductase Flavoprotein Alpha-Component and 5S rRNA and Taxonomic Trees in Selected Bacterial Species
Introduction: FAD is the cofactor of FAD-FR protein family. Sulfite reductase flavoprotein alpha-component is one of the main enzymes of this family. Based on applications of this enzyme in biotechnology and industry, it was chosen as the subject of evolutionary studies in 19 specific species. Method: Gene and protein sequences of sulfite reductase flavoprotein alpha-component, 5S rRNA sequence...
متن کاملPhylogenetic Tree Building Using a Novel Compression-based Non-symmetric Dissimilarity Measure
An approach of building phylogenetic trees is to define a distance function based on amino acid sequences of distinct proteins. The aim of this approach is to determine a weighted tree topology that approximates the entire functional similarity relations between proteins, defined by a distance function. In this case – according to the definition the similarity relation has a symmetric property....
متن کاملPhylogenetic Sequence Analysis
The aim of this handout is to present you with some theoretical background that might be helpful for building phylogenetic trees. This handout also provides an step-by-step example of how to build a phylogenetic tree 1 .
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تاریخ انتشار 2011